Research Article |
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Corresponding author: Carolyn Elinore Barnes Proença ( cproenca@unb.br ) Academic editor: Luiz Henrique Fonseca
© 2025 Carolyn Elinore Barnes Proença, Jair Eustáquio Quintino de Faria, Marla Ibrahim Uehbe de Oliveira, Julia Sonsin-Oliveira, Gustavo Hiroaki Shimizu, Vanessa Graziele Staggemeier.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Proença CEB, de Faria JEQ, de Oliveira MIU, Sonsin-Oliveira J, Shimizu GH, Staggemeier VG (2025) And the twain shall meet at the end: a phylogeny of Myrcianthes (Myrtaceae, Myrteae) with phytogeographic and morphological insights. Plant Ecology and Evolution 158(3): 457-475. https://doi.org/10.5091/plecevo.152818
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Background and aims – Myrcianthes is a New World genus of Myrtaceae with 36 species, diverse in the Andes, and often dominant in montane forests. It is found from the Pacific to the Atlantic, from sea level to 3729 m, and its total latitudinal range is almost 62°. Its old age, combined with a wide ecological and geographic range, and the many narrow-endemic species, make it of phytogeographic and evolutionary interest.
Material and methods – Altitudinal, geographic, and wood anatomy data of the genus were compiled from literature and online herbaria and curated to eliminate errors and produce a reliable dataset. ML and Bayesian phylogenetic trees based on ITS, ETS, matK, and psbA-trnH of 11 Myrcianthes species, in a matrix of 123 species, were constructed. The Bayesian tree was calibrated with three macrofossils and three secondary calibration points and used to infer biogeographic history and to estimate ancestral ranges using BioGeoBEARS.
Key results – Myrcianthes has the widest combined altitudinal/latitudinal range in Myrtaceae. Narrow-endemic species are concentrated either in the high-latitude lowlands or the low-latitude highlands. Myrcianthes diverged from Eugenia in the early Oligocene but did not diversify before the mid-Miocene (later than Eugenia). Myrcianthes diversified from the south into South America, Central America, and the Caribbean. Its ancestral range emerged as the Chacoan/Paraná dominions, consistent with the extinct temperate/subtropical austral forest. After splitting from M. coquimbensis, endemic to Chile, the main clade divided into a lowland clade (most diverse in eastern South America) and a highland clade (most diverse in the Andes). The clades are sympatric near the inferred root of the tree and probably meet again in Colombia and Venezuela. Myrcianthes wood anatomy appears to differ from that of Eugenia by the occurrence of helical thickenings in the vessels and absence of prismatic crystals in the axial parenchyma, but sampling is still incomplete.
Andes, ancestral range, fossil calibration, Gondwana, Neotropics, phylogenetic tree, wood anatomy
Myrcianthes O.Berg is a New World genus of 36 species that is noteworthy for its exceptionally wide altitudinal and latitudinal range (
The chloroplast genome of Myrcianthes pungens (O.Berg) D.Legrand is available (
Myrceugenia O.Berg and Myrcianthes are the only myrtaceous genera to occur in Chile, in the Yungas forests that run along the eastern foot of the Andes and in the Atlantic Forest (
The material cited in the Myrcianthes monograph of
To compare latitudinal and altitudinal distributions of Myrcianthes with other New World genera of Myrtaceae, we first checked distributions on Plants of the World Online (
We sampled 123 species, of which 11 were Myrcianthes species (ca one third of the species in the genus; Suppl. material
A total of 403 sequences of the internal and external transcribed spacer (ITS and ETS, respectively) of the ribosomal nuclear region and two plastid markers (matK and psbA-trnH) were already available. Ten new sequences were generated for this study; the remainder were downloaded from GenBank (Suppl. material
To construct the phylogenetic tree, we applied Maximum Likelihood (ML) analysis to a matrix with 11 Myrcianthes species (ca 1/3 of the genus); the missing data was 25% for Myrcianthes. ML analysis was performed with RAxML v.8.2.12 (
The matrix was used to explore temporal divergence among species. To calibrate the tree, we used the Bayesian inference approach implemented in BEAST2 (
Four runs of 200,000,000 generations were performed, sampling one tree every 1000th generation. Parameter convergence was confirmed by examining their posterior distributions in TRACER v.1.7.2 (
The presence of stenopalynous taxa, with certain pollen types widely scattered across the family, makes identification of suitable microfossils for tree time-calibration extremely problematic in Myrtaceae (
Therefore, we calibrated our tree with three macrofossils within Myrteae and three secondary calibration points in other Myrtales families (
The first fossil wood selected for calibration was Myrceugenelloxylon antarcticum I.Poole, R.J.Hunt & Cantrill (
The second fossil used in the calibration was the wood of Myrtineoxylon maomingense Oskolski, X.X.Feng & J.H.Jin (
The third calibration point was based on macrofossils of leaves, buds, flowers, and capsules of Eucalyptus frenguelliana from Chubut Province, Argentina (
Re-interpretation of the Myrtaceae wood anatomy (
The biogeographic history of Myrcianthes was inferred from a dated phylogeny using BioGeoBEARS v.1.1.2 (
The default configuration of BioGeoBEARS was implemented with unconstrained analysis and no time stratification nor different dispersal scalars between areas. In order to reduce the state space, range size was set to the maximum range observed in the data (three areas). Using the best model selected, the probability of possible range configuration at each internal node was estimated and mapped onto the calibrated tree to provide a general picture of the biogeographic origin of each clade.
Species names and circumscriptions for Myrcianthes follows
Morphological data was gathered from the taxonomic descriptions in
Wood anatomy data was gathered from the literature. The species Myrcianthes cruciata M.Ibrahim & Proença was published together with the characterization of its wood anatomy, and an overview of the wood anatomy of the genus Myrcianthes (
The geographic and altitudinal database is stored in BRAHMS and includes 1,228 georeferenced records of the 36 currently accepted species of the genus and is available from the corresponding author. A list of extreme latitudinal and altitudinal records of Myrcianthes is available for each species in Suppl. material
Relationship between average latitude and average altitude for accepted Myrcianthes species. Bars represent altitudinal intervals (bars for M. osteomeloides and M. pseudomato are truncated at 3500 m). Species with asterisks are narrow endemics restricted to < 1° of latitude; pale grey balloons are species not included in the phylogeny; the dark grey balloon is the sister species to all other sampled species; violet balloons are lowland clade species; green balloons are highland clade species.
Plotting the latitudinal and altitudinal averages (with interval bars for minimum and maximum values of altitude) allows a rough overview of the geographic/altitudinal ecospace (G/A ecospace) of each species in the Americas (Fig.
Narrow-endemic species occur in two different areas of the G/A ecospace. The first suite of narrow endemics (four species) appears in the right-hand corner, at the more southerly latitudes and lower altitudes. The second suite of narrow-endemic species are scattered over the lower latitudes (7°N–13°S) and have their altitudinal midpoints above 2300 m, i.e. they are cloud forest species, with the possible exception of M. monteucalyptoides Proença & L.V.S.Jenn. (recorded altitude 1460 m) although the original authors questioned this altitude since the type locality, Tarma, Peru, is located at ca 3000 m and the nearest locality in the vicinity of Tarma with the altitude cited on the type specimen is 50 km distant (
Two-thirds of the 36 Myrcianthes species remain unsampled in the phylogeny and they are mainly from the Andes suggesting where future efforts should be focused, as well as the Guyanas. Myrcianthes emerged as a monophyletic genus with high bootstrap support in the ML tree (96 BS; Fig.
ML tree of Myrcianthes based on ITS, ETS, psbA-trnH, and matK. Bootstrap values are to the right of the nodes. The green clade contains highland species, while the purple clade contains lowland species. Presence of sequences is represented by blue squares, while missing data are blank squares.
Divergence time estimates (Fig.
The model that conferred the best likelihood on our Myrcianthes dataset was BAYAREALIKE+J with an AICc of 67.36 (80% of probability), while the next closest model (DEC) had an AICc of 72.07, and all the rest were > 73.29 (Table
Comparison of biogeographic models on Myrcianthes, constrained to the maximum number of areas equals three. Best model in bold.
| Ln L | Parameter estimates | AIC | AICc | AICc weights | ||||
| Number | Dispersal (d) | Extinction (e) | Founder effect (j) | |||||
| DEC | -33.28 | 2 | 0.013 | 0.010 | 0.000 | 70.57 | 72.07 | 0.076 |
| DEC+J | -32.18 | 3 | 0.011 | 0.003 | 0.064 | 70.37 | 73.80 | 0.032 |
| DIVALIKE | -33.89 | 2 | 0.016 | 1E−12 | 0.000 | 71.79 | 73.29 | 0.041 |
| DIVALIKE+J | -32.32 | 3 | 0.013 | 1E−12 | 0.063 | 70.63 | 74.06 | 0.028 |
| BAYAREALIKE | -34.56 | 2 | 0.015 | 0.062 | 0.000 | 73.11 | 74.61 | 0.021 |
| BAYAREALIKE+J | -28.96 | 3 | 0.004 | 1E−7 | 0.117 | 63.93 | 67.36 | 0.801 |
We examined the floral characters from the literature (
Five species of Myrcianthes have been sampled from previous studies on wood anatomy (
Wood anatomical features of Myrcianthes (only of sampled species) compared to its sister genus Eugenia. M. coq. = Myrcianthes coquimbensis; M. cru. = Myrcianthes cruciata; M. cis. = Myrcianthes cisplatensis; M. fra. = Myrcianthes fragrans; M. gig. = Myrcianthes gigantea; M. pun. = Myrcianthes pungens.
| Wood anatomical features | Myrcianthes basal species | Myrcianthes Lowland clade | Myrcianthes Highland clade | Eugenia spp. | |||
| M. coq. | M. cru. | M. cis. | M. fra. | M. gig. | M. pun. | ||
| Helical thickenings in the vessels | 0 | 0 | + | +? | + | 0 | 0 (31 spp.) |
| Parenchyma apotracheal forming irregular lines or bands | ? | + | + | +? | 0 | + | 0 (2 spp.) + (17 spp.) |
| Prismatic crystals in the axial parenchyma | ? | 0 | 0 | + | + | + | + (19 spp.) |
| Crystals in idioblasts | ? | 0 | 0 | 0 | 0 | + | 0 (9 spp.) + (10 spp.) |
Myrcianthes coquimbensis (Fig.
Geographic distribution of Myrcianthes. A. Highland clade species represented in the phylogenetic tree. B. Lowland clade species represented in the phylogenetic tree. C. Not sampled species showing major geographic overlap with the sampled species, except for M. prodigiosa (Guyana Highlands and peri-Amazonia in Bolivia and Brazil).
The lowland clade has a broad latitudinal range (Fig.
Our results for Myrcianthes show that the genus is monophyletic and confirm prior studies that it is sister to Eugenia (
We also confirm the finding of
The highland clade is represented in our study by six species (Figs
The highland clade crown is slightly older (ca 13.7 my old) than the lowland clade crown (ca 11.4 my old). Miocene diversification of the Myrcianthes highland clade in the Andes is congruent with increased uplift rates in the Eastern Cordillera, Cordillera Real, and Cordillera de Merida from the late Miocene onwards (
The lowland clade of Myrcianthes is represented by four species in our study (Figs
The number of ovules per locule in Myrcianthes is 5–30 but in the most austral, lowland species, numbers of ovules per locule ranged between 5–15: M. cisplatensis (up to 15), M. coquimbensis (5–11), M. pedersenii (6–8), M. riparia (up to 9), and M. sessilis McVaugh (ca 8). Reconstruction of ancestral character states on a larger sample of species would be necessary to state with confidence that a low number of ovules per locule is the ancestral state.
A recent phylogenomic reconstruction of Eugenia recovered Myrcianthes as its sister genus (
After this first split-off of E. splendens, the phylogenomic reconstruction (
Interestingly, it has recently come to light that E. splendens forms a clade (0.94 PP,
Myrcianthes did not diversify before the middle of the Miocene, the only exception being the splitting off of M. coquimbensis from the main lineage (which occurred at the end of the Oligocene). Eugenia, on the other hand, showed significant diversification in the late Oligocene, and, by the end of the Oligocene/early Miocene all the main lineages had already diverged; this pattern is similar to that found by The Neotropical Myrtaceae Working Group (
There is a very broad study across the Myrtaceae of helical thickenings in the vessels (
Most species of Myrcianthes sampled in the study by
Myrcianthes emerges as a promising model genus to study dispersal of ancient Gondwanan clades in the Americas. The different wood anatomy characters of Myrcianthes as compared to those of Eugenia are likely to be a combination of phylogenetic signal and ecological selection and merit further additional sampling and investigation. Our biogeographic hypothesis, based on a still incomplete phylogeny, will be presented here as a challenge. The genus was probably reasonable diverse in the Oligocene, when paleoclimatic and palaeogeographic events reduced its species or populations to the first suite of endemics that still persist in highly specialized, local conditions such as M. coquimbensis, M. pedersenii, and M. riparia; these three species are probably paleo-endemics. Two clades escaped this scenario by dispersing northwards. The lowland, less diverse clade adapted to lowland conditions and advanced through the Atlantic Forest of Brazil, with one species, M. fragrans, eventually reaching northern South America and occupying the Caribbean and southern Florida and Mexico. The highland, more diverse clade advanced through the Andes, where it successfully diversified along an altitudinal gradient, giving rise to several relatively wide-spread species, and to a second suite of narrow-endemic species, most of which are cloud forest species; these are more likely to be neo-endemics, at least relative to the first suite. Myrcianthes fragrans, a lowland clade species, is morphologically highly variable with five different ecotypes and a vast synonymy (
This work was supported by a Research grant and PhD student grants to work on the phylogeny of Myrtaceae to CEBP, GHS, VGS, and JEQF from CNPq (Conselho Nacional de Desenvolvimento Científico e Tecnológico), FAPDF (Fundação de Apoio à Pesquisa do Distrito Federal), FAPESP (Fundação de Amparo à Pesquisa do Estado de São Paulo), and CAPES (Coordenação de Aperfeiçoamento de Pessoal do Ensino Superior). All authors thank Kyle Dexter, Elena Conti, and Amy Litt for kindly answering various queries, and Fabiano Dantas, Marta Farias, Paulo Henrique Gaem, and Les Landrum for allowing the use of their images. Stephen A. Harris provided a critical review of an earlier version of the manuscript and the anonymous reviewers and editors also provided many useful suggestions.
Table S1. Species with geographic and altitudinal extremes and averages, and countries of occurrence.
Table S2. Species, vouchers, and GenBank accession numbers for molecular markers.
Table S3. Fossils and secondary calibration points used in the divergence time estimation analysis.
Table S4. Similarities between chosen fossil 1 (bold) and most similar modern wood.
Table S5. Similarities between chosen fossil 2 (bold) and most similar modern wood
Table S6. Percentage of occurrences in each neotropical bioregion adapted from the
Table S7. Vouchers for extreme latitudes and altitudes of widespread Neotropical genera of Myrtaceae.
Figure S1. Maximum likelihood tree based on ITS, ETS, psbA-trnH, and matK. Bootstrap values to the right of nodes. All tips are shown.
Figure S2. Bayesian phylogenetic tree based on ITS, ETS, psbA-trnH, and matK. Posterior probability values to the right of the nodes. Some Myrcianthes vouchers combined to compose one terminal per species. A, B, C, D, E, F = calibration points (see Table S3). All tips are shown.
Figure S3. Bayesian phylogenetic tree based on ITS, ETS, psbA-trnH, and matK. Ages to the right of the nodes. For posterior probability values, see Fig. S2. A, B, C, D, E, F = calibration points (see Table S3). All tips are shown.
Figure S4. Geographic distribution of Myrcianthes ferreyrae, M. osteomeloides, M. pungens, and M. roncesvallensis. Colours highlighting species names correspond to dots.
Figure S5. Geographic distribution of Myrcianthes callicoma, M. cisplatensis, M. coquimbensis, and M. cruciata. Colours highlighting species names correspond to dots.
Figure S6. Geographic distribution of Myrcianthes fragrans, M. gigantea, and M. pseudomato. Colours highlighting species names correspond to dots.